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Packages that use AlreadyExistsException | |
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org.biojava.ontology | A general-purpose API for ontologies. |
org.biojavax.ontology | Extensions to the biojava ontology model that represent BioSQL ontology. |
Uses of AlreadyExistsException in org.biojava.ontology |
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Methods in org.biojava.ontology that throw AlreadyExistsException | |
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OntologyTerm |
Ontology.Impl.createOntologyTerm(Ontology o)
|
Term |
Ontology.createTerm(String name,
String description)
Create a new term in this ontology. |
Term |
Ontology.Impl.createTerm(String name,
String description)
|
Term |
IntegerOntology.createTerm(String name,
String description)
|
Term |
Ontology.createTerm(String name,
String description,
Object[] synonyms)
Create a new term in this ontology. |
Term |
Ontology.Impl.createTerm(String name,
String description,
Object[] synonyms)
|
Term |
IntegerOntology.createTerm(String name,
String description,
Object[] synonyms)
|
Triple |
Ontology.createTriple(Term subject,
Term object,
Term predicate,
String name,
String description)
Creates a new Triple. |
Triple |
Ontology.Impl.createTriple(Term subject,
Term object,
Term predicate,
String name,
String description)
|
Triple |
IntegerOntology.createTriple(Term subject,
Term object,
Term predicate,
String name,
String description)
|
Variable |
Ontology.createVariable(String name,
String description)
Create a new term in this ontology that is used as a variable. |
Variable |
Ontology.Impl.createVariable(String name,
String description)
|
Variable |
IntegerOntology.createVariable(String name,
String description)
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Uses of AlreadyExistsException in org.biojavax.ontology |
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Methods in org.biojavax.ontology that throw AlreadyExistsException | |
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void |
ComparableTriple.addDescriptor(ComparableTerm desc)
Adds a descriptor. |
Term |
SimpleComparableOntology.createTerm(String name,
String description)
Create a new term in this ontology. |
Term |
SimpleComparableOntology.createTerm(String name,
String description,
Object[] synonyms)
Create a new term in this ontology. |
Triple |
SimpleComparableOntology.createTriple(Term subject,
Term object,
Term predicate,
String name,
String description)
Creates a new Triple. If you call this method with plain Terms instead of ComparableTerms, it will import them into the local ontology first. |
Variable |
SimpleComparableOntology.createVariable(String name,
String description)
Create a new term in this ontology that is used as a variable. NOT IMPLEMENTED |
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