|
||||||||||
PREV PACKAGE NEXT PACKAGE | FRAMES NO FRAMES |
See:
Description
Interface Summary | |
---|---|
AminoAcid | AminoAcid inherits most from Hetatom. |
Atom | simple interface of an Atom. |
Chain | Defines the interface for a Chain. |
Group | This is the datastructure for a single Group of atoms. |
Structure | Interface for a structure object. |
Class Summary | |
---|---|
AlphaCTools | AlphaCTools is a collection of static convenience methods for dealing with Alpha Carbon Backbone Phi / Psi angles. |
AminoAcidImpl | AminoAcid inherits most from Hetatom. |
AtomImpl | Implementation of an Atom of a PDB file. |
AtomIterator | an iterator over all atoms of a structure / group. |
Calc | utility operations on Atoms, AminoAcids, etc. |
ChainImpl | A Chain in a PDB file. |
GroupIterator | an iterator over all groups of a structure. |
HetatomImpl | Generic Implementation of a Group interface. |
Mutator | A class that can change one amino acid to another. |
NucleotideImpl | A nucleotide group is almost the same as a Hetatm group. |
StandardAminoAcid | A class that provides a set of standard amino acids |
StructureImpl | Implementation of a PDB Structure. |
StructureTools | a class that provides some tool methods |
SVDSuperimposer | a class that calculates the superimposition between two sets of atoms inspired by the biopython SVDSuperimposer class... |
Exception Summary | |
---|---|
StructureException | An exception during the parsing of a PDB file. |
Interfaces and classes for protein structure (PDB).
|
||||||||||
PREV PACKAGE NEXT PACKAGE | FRAMES NO FRAMES |