Uses of Interface
org.biojava.bio.program.gff.GFFRecord

Packages that use GFFRecord
org.biojava.bio.program.gff GFF manipulation. 
 

Uses of GFFRecord in org.biojava.bio.program.gff
 

Classes in org.biojava.bio.program.gff that implement GFFRecord
 class SimpleGFFRecord
          A no-frills implementation of a GFFRecord.
 

Methods in org.biojava.bio.program.gff that return GFFRecord
protected  GFFRecord GFFParser.createRecord(GFFDocumentHandler handler, List aList, String rest, String comment)
          Actually turns a list of tokens, some value string and a comment into a GFFRecord and informs handler.
 

Methods in org.biojava.bio.program.gff with parameters of type GFFRecord
 boolean GFFRecordFilter.accept(GFFRecord record)
          Return whether or not to accept record.
 boolean GFFRecordFilter.AcceptAll.accept(GFFRecord record)
           
 boolean GFFRecordFilter.SequenceFilter.accept(GFFRecord record)
           
 boolean GFFRecordFilter.StrandFilter.accept(GFFRecord record)
           
 boolean GFFRecordFilter.SourceFilter.accept(GFFRecord record)
           
 boolean GFFRecordFilter.FeatureFilter.accept(GFFRecord record)
           
 boolean GFFRecordFilter.FrameFilter.accept(GFFRecord record)
           
 boolean GFFRecordFilter.NotFilter.accept(GFFRecord record)
           
 void GFFEntrySet.add(GFFRecord record)
          Add a GFFRecord to the end of this set.
 void GFFDocumentHandler.recordLine(GFFRecord record)
          A record line has been encountered.
 void GFFWriter.recordLine(GFFRecord record)
          Prints record to the PrintWriter.
 void GFFFilterer.recordLine(GFFRecord record)
          Only forward the GFFRecords that match a filter.
 

Constructors in org.biojava.bio.program.gff with parameters of type GFFRecord
SimpleGFFRecord(GFFRecord rec)
          Create a new SimpleGFFRecord from GFFRecord object