org.biojavax.bio.seq.io
Class EMBLFormat.Terms

java.lang.Object
  extended by org.biojavax.bio.seq.RichSequence.Terms
      extended by org.biojavax.bio.seq.io.EMBLFormat.Terms
Enclosing class:
EMBLFormat

public static class EMBLFormat.Terms
extends RichSequence.Terms

Implements some EMBL-specific terms.


Field Summary
 
Fields inherited from class org.biojavax.bio.seq.RichSequence.Terms
DOI_KEY, MEDLINE_KEY, PLASMID_KEY, PUBMED_KEY, SPECIES_KEY, STRAIN_KEY, TISSUE_KEY, TRANSPOSON_KEY
 
Constructor Summary
EMBLFormat.Terms()
           
 
Method Summary
static ComparableTerm getDataClassTerm()
          Getter for the Ensembl-specific 'dataClass' term
static ComparableTerm getEMBLTerm()
          Getter for the EMBL term
static ComparableTerm getGenomicTerm()
          Getter for the Ensembl-specific 'genomic' term
static ComparableTerm getVersionLineTerm()
          Getter for the Ensembl-specific 'versionLine' term
 
Methods inherited from class org.biojavax.bio.seq.RichSequence.Terms
getAdditionalAccessionTerm, getCopyrightTerm, getDateAnnotatedTerm, getDateCreatedTerm, getDateUpdatedTerm, getFeatureDescTerm, getFTIdTerm, getGeneNameTerm, getGeneSynonymTerm, getKeywordTerm, getMolTypeTerm, getOrderedLocusNameTerm, getORFNameTerm, getOrganelleTerm, getPlasmidTerm, getRelAnnotatedTerm, getRelCreatedTerm, getRelUpdatedTerm, getSpeciesTerm, getStrainTerm, getStrandedTerm, getTissueTerm, getTransposonTerm
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

EMBLFormat.Terms

public EMBLFormat.Terms()
Method Detail

getEMBLTerm

public static ComparableTerm getEMBLTerm()
Getter for the EMBL term

Returns:
The EMBL Term

getGenomicTerm

public static ComparableTerm getGenomicTerm()
Getter for the Ensembl-specific 'genomic' term

Returns:
The genomic Term

getVersionLineTerm

public static ComparableTerm getVersionLineTerm()
Getter for the Ensembl-specific 'versionLine' term

Returns:
The version line Term

getDataClassTerm

public static ComparableTerm getDataClassTerm()
Getter for the Ensembl-specific 'dataClass' term

Returns:
The data class Term