org.biojava.bio.program.formats
Class Ligand.Reaction

java.lang.Object
  extended by org.biojava.bio.program.formats.Ligand.Reaction
All Implemented Interfaces:
Format
Enclosing class:
Ligand

public static class Ligand.Reaction
extends Object
implements Format


Constructor Summary
Ligand.Reaction()
           
 
Method Summary
 LifeScienceIdentifier getLSID()
          Retrieve the LSID associated with this format.
 ParserListener getParserListener(TagValueListener listener)
          Retrieve a ParserListener pair for the format that will pass all events on to a listener.
 AnnotationType getType()
          Get the AnnotationType that constrains the events that will be fired.
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

Ligand.Reaction

public Ligand.Reaction()
Method Detail

getParserListener

public ParserListener getParserListener(TagValueListener listener)
Description copied from interface: Format
Retrieve a ParserListener pair for the format that will pass all events on to a listener.

Specified by:
getParserListener in interface Format
Parameters:
listener - a TagValueListener that all events should be passed onto
Returns:
a ParserListener for the format

getType

public AnnotationType getType()
Description copied from interface: Format
Get the AnnotationType that constrains the events that will be fired.

Specified by:
getType in interface Format
Returns:
an AnnotationType representingchema for the events

getLSID

public LifeScienceIdentifier getLSID()
Description copied from interface: Format
Retrieve the LSID associated with this format.

The OBDA recomends taht file formats have identifiers assopciated with them. This allows the format to be specified unambiguously across different projects and groups. Idealy, a format LSID should conform to the odda formats specification.

Specified by:
getLSID in interface Format