Safe Haskell | Safe-Inferred |
---|---|
Language | Haskell98 |
Bio.Alignment.PSL
Description
This models the PSL format used by e.g. the alignment tool BLAT. It is a simple, textual representation of (spliced) alignments, with tab-separated fields.
See http:/genome.ucsc.eduFAQ/FAQformat#format2 for details.
Documentation
data PSL
Constructors
PSL | |
Fields
|
parsePSL :: ByteString -> [PSL]
unparsePSL :: [PSL] -> ByteString