libpappsomspp
Library for mass spectrometry
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pappso::specglob::PeptideModel Member List

This is the complete list of members for pappso::specglob::PeptideModel, including all inherited members.

assignResidualMass2Cter()pappso::specglob::PeptideModel
checkForAaModification(const pappso::Aa &aa_modified, pappso::PrecisionPtr precision)pappso::specglob::PeptideModel
checkForAaModificationP(pappso::AaModificationP modification, pappso::PrecisionPtr precision)pappso::specglob::PeptideModel
checkForMutation(const pappso::Aa &amino_acid_candidate, pappso::PrecisionPtr precision)pappso::specglob::PeptideModel
checkForMutations(const std::vector< AminoAcidChar > &aa_list, pappso::PrecisionPtr precision)pappso::specglob::PeptideModel
copyDeep(const PeptideModel &other)pappso::specglob::PeptideModel
eliminateComplementaryDelta(pappso::PrecisionPtr precision)pappso::specglob::PeptideModel
eliminateNegativeOffset(pappso::PrecisionPtr precision)pappso::specglob::PeptideModel
generateTheoreticalPeaks(pappso::PrecisionPtr precision)pappso::specglob::PeptideModelprivate
getCountSharedPeaks() constpappso::specglob::PeptideModel
getIntensityExperimentalPeaks() constpappso::specglob::PeptideModel
getIntensitySharedPeaks() constpappso::specglob::PeptideModel
getMass() constpappso::specglob::PeptideModel
getMassDelta() constpappso::specglob::PeptideModel
getTheoreticalIonMassList() constpappso::specglob::PeptideModel
getTheoreticalPeakDataPointList() constpappso::specglob::PeptideModel
getTheoreticalPeakDataPointListToString() constpappso::specglob::PeptideModel
m_beginMassDeltapappso::specglob::PeptideModelprivate
m_countSharedPeakspappso::specglob::PeptideModelprivate
m_cterModificationpappso::specglob::PeptideModelprivate
m_experimentalPrecursorMasspappso::specglob::PeptideModelprivate
m_intensityExperimentalPeakspappso::specglob::PeptideModelprivate
m_intensitySharedPeakspappso::specglob::PeptideModelprivate
m_nterModificationpappso::specglob::PeptideModelprivate
m_theoreticalPeakListpappso::specglob::PeptideModelprivate
matchExperimentalPeaks(pappso::PrecisionPtr precision)pappso::specglob::PeptideModel
mcsp_peakListpappso::specglob::PeptideModelprivate
modifCount() constpappso::specglob::PeptideModel
operator=(const PeptideModel &other)pappso::specglob::PeptideModel
PeptideModel(const pappso::QualifiedMassSpectrum &qmass_spectrum, const pappso::Peptide &peptide)pappso::specglob::PeptideModel
PeptideModel()pappso::specglob::PeptideModel
PeptideModel(const PeptideModel &other)pappso::specglob::PeptideModel
removeBracketsForAlignedAA()pappso::specglob::PeptideModel
setBeginMassDelta(double)pappso::specglob::PeptideModel
toProForma() constpappso::specglob::PeptideModel
toString() constpappso::specglob::PeptideModel
~PeptideModel()pappso::specglob::PeptideModelvirtual