libpappsomspp
Library for mass spectrometry
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Member cubic_solver (InHousePolynomialSolverResult &res, double a1, double b, double c, double d)
Cardaono cubic solver
Namespace pappso

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Class pappso::CosineSimilarity
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Class pappso::FilterSuiteString
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Class pappso::FilterTriangle
sum peaks under a triangle base
Class pappso::IonMobilityGrid
helper to align ion mobility ranges between MS runs
Class pappso::MgfOutput
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Class pappso::MzCalibrationInterface
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Member pappso::MzCalibrationInterface::operator== (const MzCalibrationInterface &other) const
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Class pappso::MzCalibrationModel1
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Class pappso::MzCalibrationStore
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Member pappso::MzCalibrationStore::MzCalibrationStore ()
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Member pappso::MzCalibrationStore::~MzCalibrationStore ()
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Class pappso::MzIdentMlWriter
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Class pappso::MzxmlOutput
use msrunreader as input and writes all peaks into an mzXML output stream
Class pappso::OboListModel
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Class pappso::OboListProxyModel
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Class pappso::PeptideProFormaParser
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Class pappso::PsmFeatures
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Class pappso::specglob::ExperimentalSpectrum
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Class pappso::specglob::PeptideModel
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Class pappso::specglob::PeptideSpectrum
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Class pappso::specglob::PostTreatment
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Class pappso::specglob::ScoreValues
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Class pappso::specglob::SpectralAlignment
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Class pappso::spectree::ItemCart
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Class pappso::spectree::SpecTree
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Class pappso::TimsBinDec
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Class pappso::TimsData
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Member pappso::TimsData::getClosestPrecursorIdByMz (std::vector< std::vector< double > > ids, double mz_value)
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Class pappso::TimsDirectXicExtractor
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Class pappso::TimsFrame
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Class pappso::TimsFrameBase
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Class pappso::TimsFrameRawDataChunck
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Member pappso::TimsFramesMsRunReader::TimsFramesMsRunReader (MsRunIdCstSPtr &msrun_id_csp)
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Class pappso::TimsFrameType1
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Class pappso::TimsMs2CentroidFilter
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Class pappso::TimsMsFileReader
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Member pappso::TimsMsRunReader::TimsMsRunReader (MsRunIdCstSPtr &msrun_id_csp)
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Member pappso::TimsMsRunReaderMs2::TimsMsRunReaderMs2 (MsRunIdCstSPtr &msrun_id_csp)
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Member pappso::TimsMsRunReaderMs2Selected::TimsMsRunReaderMs2Selected (MsRunIdCstSPtr &msrun_id_csp)
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Class pappso::TimsXicExtractorInterface
set of minimum functions to build XICs using Tims data
Class pappso::TracePeakList
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Class pappso::UiMonitorInterface
pure virtual user interface class to monitor any long process it contains :
  • title, status, progress messages
  • callback functions to interrupt long process it does not contains any error messages functions : use pappso::ExceptionInterrupted to handle this
Class pappso::UiMonitorText
simple text monitor using text stream
Class pappso::UiMonitorTextPercent
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Class pappso::UiMonitorVoid
nothing monitor to save CPU and memory if needed
Class pappso::WrapTandemInput
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Class pappso::WrapTandemResults
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File peptidemodel.h
https://www.psidev.info/proforma